@sodaviz/rmsk-soda v1.1.0

rmsk-soda

A SODA visualization for Transposable Elements repeats as annotated by RepeatMasker.

About

This project is an NPM package that provides some extensions to SODA that produce an interactive visualization of Transposable Elements and simple repeats. It is largely a reimplementation of the UCSC Genome Browser RepeatMasker Viz track with improved functionality. The example application can be found live on the soda website.

Usage

The easiest way to use rmsk-soda is with the NPM package manager.

Once you have NPM installed, you can install rmsk-soda with:

npm install @sodaviz/rmsk-soda

If you would like to run the rmsk-soda example application locally, clone the repository and run:

npm i 
make build
cd example
npm i
make serve