@test2learn/hts_wasm v0.1.0

HTS WASM

Webassembly targeted functions for working with genomic data in a browser-environment.

Use-Cases

Test2Learn Web Tool

Working with locally stored VCF files with parse_bam().

How to use

API

The API is exposed through functions in hts_wasm_module.js

vcf.js

Contains functions for parsing and querying VCF files.

TODO: Docs

write_input_vcf(vcf, index)
lookup_variant(vcf_file, query_string)

TODO

• HTS files over HTTP/HTTPS/FTP that don't require any local storage
• Error handling for memory out-of-bounds
• bam modules