galaxy-workflow-to-arc v0.1.0

galaxy-workflow-to-arc

Generates an ARC ready CWL workflow and run from a Galaxy workflow(.ga) file

Installation

To use galaxy-workflow-to-arc, make sure node.js is installed. Then execute:

npm i -g galaxy-workflow-to-arc

Usage:

Galaxy workflow to ARC

  Generates an ARC ready CWL workflow and run from a Galaxy workflow(.ga) file 

Options

  -i, --workflowFile string   Path to the Galaxy workflow file to process       
  -n, --runName string        Name of the resulting run and workflow (default:  
                              name of the .ga file)                             
  -o, --outFolder string      Path to place the results in (default: ./out)     
  -h, --help                  Prints this dialogue