0.1.0 • Published 6 years ago
mitochondrial-muscle v0.1.0
mitochondrial-muscle
This is Node.js wrapper over MUSCLE software specifically for mitochondrial genomes aligning.
process.env.MUSCLE_BIN
should be set to MUSCLE binary path.
Usage
const muscle = require('mitochondrial-muscle')
...
const reference = 'RSRS' // or 'rCRS'
const [seq1, seq2] = await muscle.align(pathToMyFasta, reference)
const ref = seq1.label === reference ? seq1 : seq2
const seq = seq1.label !== reference ? seq1 : seq2
...
Tests
yarn test
0.1.0
6 years ago