phyml-task v1.0.0

////////////////////////////////////////////////////////////////////////////////////////////////////// // You downloaded a stable release of PhyML from https://github.com/stephaneguindon/phyml/releases // //////////////////////////////////////////////////////////////////////////////////////////////////////

To install any program that is part of the PhyML package, type the following commands: ./configure --enable-XXXX; make; where XXXX is phyml or phyrex or phytime.

To compile a Windows executable, install MinGW and run: ./configure --enable-win --enable-XXXX; make;

To install the MPI version of PhyML, type the following commands: autoreconf -i; ./configure --enable-mpi --enable-phyml; make;

If you are using a Mac computer, you will need to install the package pkg-config. The following command should set you up (provided Homebrew is installed on your Mac...): brew install pkg-config; Next, typing './configure --enable-XXXX; make;' should generate the phyml binary in the src/ directory.

////////////////////////////////////////////////////////////////////////// // You have cloned PhyML from GitHub // //////////////////////////////////////////////////////////////////////////

To install any program that is part of the PhyML package, type the following command: sh ./autogen.sh;

If you are using a Mac computer or running a Unix-like operating system, you will need to install the packages autoconf automake and pkg-config. On a Mac, the following command should set you up (provided Homebrew is installed on your Mac...): brew install pkg-config autoconf automake;

Next, typing './configure --enable-XXXX; make;' should generate the phyml binary in the src/ directory, where XXXX is phyml or phyrex or phytime.