react_helm_editor v0.1.1
HELM
HELM (hierarchical editing language for macromolecules) is both a notation, and a set of tools and applications that implement the notation. It allows (among other things) the compact representation of complex biomolecules, includes the ability to use non-natural monomers, enables you to create conjugates of different types of polymers or small molecules and describe ambiguity.
Our wiki is the best place to start if you have a general interest in HELM. You can get easy access to compiled versions of the tools, links to the documentation including slide sets, videos and information about the community and project.
Developers will find all the open source code under this PistoiaHELM organisation.
We have an active group which meets regularly and works on extending the tools and supporting HELM. We love it when new people want to get involved, so please do get in touch.
Email us at info@openHELM.org
HELM WebEditor react
The HELM Web Editor react (HWE) is a react based implementation of HELM. The webeditor depends on a a set of services which have been split into modules for easier maintenance. The diagram below shows the relationship between the components.
The HWE react component has several props to note:
- helmNotation: input helm notation to be rendered/analyzed by HWE
- helmCallback: callback after exiting HWE, contains div with the svg image and JSON stringified object containing the helm notation, molecular formula, weight, and extinction coefficient
- customConfig: custom configuration settings for HWE
This project was bootstrapped with Create React App.
Available Scripts
In the project directory, you can run:
yarn start
Runs the app in the development mode. Open http://localhost:3000 to view it in the browser.
The page will reload if you make edits. You will also see any lint errors in the console.
yarn test
Launches the test runner in the interactive watch mode. See the section about running tests for more information.
yarn build
Builds the app for production to the build folder.
It correctly bundles React in production mode and optimizes the build for the best performance.
The build is minified and the filenames include the hashes. Your app is ready to be deployed!
See the section about deployment for more information.
yarn eject
Note: this is a one-way operation. Once you eject, you can’t go back!
If you aren’t satisfied with the build tool and configuration choices, you can eject at any time. This command will remove the single build dependency from your project.
Instead, it will copy all the configuration files and the transitive dependencies (webpack, Babel, ESLint, etc) right into your project so you have full control over them. All of the commands except eject will still work, but they will point to the copied scripts so you can tweak them. At this point you’re on your own.
You don’t have to ever use eject. The curated feature set is suitable for small and middle deployments, and you shouldn’t feel obligated to use this feature. However we understand that this tool wouldn’t be useful if you couldn’t customize it when you are ready for it.
Learn More
You can learn more in the Create React App documentation.
To learn React, check out the React documentation.
Code Splitting
This section has moved here: https://facebook.github.io/create-react-app/docs/code-splitting
Analyzing the Bundle Size
This section has moved here: https://facebook.github.io/create-react-app/docs/analyzing-the-bundle-size
Making a Progressive Web App
This section has moved here: https://facebook.github.io/create-react-app/docs/making-a-progressive-web-app
Advanced Configuration
This section has moved here: https://facebook.github.io/create-react-app/docs/advanced-configuration
Deployment
This section has moved here: https://facebook.github.io/create-react-app/docs/deployment
yarn build fails to minify
This section has moved here: https://facebook.github.io/create-react-app/docs/troubleshooting#npm-run-build-fails-to-minify