ribxz v0.0.0

oclif-hello-world

oclif example Hello World CLI

• Usage
• Commands

Usage

$ npm install -g ribxz
$ ribxz COMMAND
running command...
$ ribxz (--version)
ribxz/0.0.0 linux-x64 node-v14.17.6
$ ribxz --help [COMMAND]
USAGE
  $ ribxz COMMAND
...

Commands

• ribxz db
• ribxz struct RCSB_ID
• ribxz struct show RCSB_ID

ribxz db

describe the command here

USAGE
  $ ribxz db [-r <value>] [-a <value>] [-p <value>] [-u <value>] [-d <value>] [--PYTHONBIN <value>]
    [--COMMIT_STRUCTURE_SH <value>] [--EXTRACT_BSITES_PY <value>] [--RENDER_THUMBNAIL_PY <value>] [--SPLIT_RENAME_PY
    <value>] [-e <value>] [-f]

FLAGS
  -a, --NEO4J_URI=<value>
  -d, --NEO4J_CURRENTDB=<value>
  -e, --env=<value>              Environment variable
  -f, --force
  -p, --NEO4J_PASSWORD=<value>
  -r, --RIBETL_DATA=<value>
  -u, --NEO4J_USER=<value>
  --COMMIT_STRUCTURE_SH=<value>
  --EXTRACT_BSITES_PY=<value>
  --PYTHONBIN=<value>
  --RENDER_THUMBNAIL_PY=<value>
  --SPLIT_RENAME_PY=<value>

DESCRIPTION
  describe the command here

See code: dist/commands/db/index.ts

ribxz struct RCSB_ID

USAGE
  $ ribxz struct [RCSB_ID] [-r <value>] [-a <value>] [-p <value>] [-u <value>] [-d <value>] [-e <value>]

FLAGS
  -a, --NEO4J_URI=<value>
  -d, --NEO4J_CURRENTDB=<value>
  -e, --env=<value>              Environment variable
  -p, --NEO4J_PASSWORD=<value>
  -r, --RIBETL_DATA=<value>
  -u, --NEO4J_USER=<value>

See code: dist/commands/struct/index.ts

ribxz struct show RCSB_ID

Query structure in the database

USAGE
  $ ribxz struct show [RCSB_ID] [-r <value>] [-a <value>] [-p <value>] [-u <value>] [-d <value>] [--PYTHONBIN
    <value>] [--COMMIT_STRUCTURE_SH <value>] [--EXTRACT_BSITES_PY <value>] [--RENDER_THUMBNAIL_PY <value>]
    [--SPLIT_RENAME_PY <value>] [-e <value>] [--files] [--db] [-R] [-C] [--dryrun] [-f]

FLAGS
  -C, --commit
  -R, --repair
  -a, --NEO4J_URI=<value>
  -d, --NEO4J_CURRENTDB=<value>
  -e, --env=<value>              Environment variable
  -f, --force
  -p, --NEO4J_PASSWORD=<value>
  -r, --RIBETL_DATA=<value>
  -u, --NEO4J_USER=<value>
  --COMMIT_STRUCTURE_SH=<value>
  --EXTRACT_BSITES_PY=<value>
  --PYTHONBIN=<value>
  --RENDER_THUMBNAIL_PY=<value>
  --SPLIT_RENAME_PY=<value>
  --db
  --dryrun
  --files

DESCRIPTION
  Query structure in the database