Genomics Packages

A BED file format parser with autoSql support

JBrowse 2 core libraries used by plugins

Development fork of igv.js, for patches before merging upstream

Provides SVG View for Genome Features rendered with the Apollo Track Web Service via JBrowse

Read and write UCSC track and assembly hub files in node or the browser

JBrowse 2 core libraries used by plugins

Read features from JBrowse 1 format nested containment list JSON

Experimental

Components for displaying FHIR genomic reports complying to the FHIR Genomics Reporting Implementation Guide http://hl7.org/fhir/uv/genomics-reporting/.

WashU Epigenome Browser

Chromosomal region class used in GIVE, supporting some basic region operations

Genomic data parser component based on the Integrative Genomics Viewer

A library to support headers compatible with BITK's standard.

GenomiX React components

Embeddable genomic visualization component based on the Integrative Genomics Viewer

A unique visualisation of any large chunk of DNA or RNA residing in ASCII text files (such as FASTA, GBK etc and also just .txt like my hand-made test files), AminoSee is a way to render huge genomics files into a left-to-right top-bottom PNG linear image

Nucleotide sequence manipulation and analysis library

Chromosome visualization with D3.js

A Node.js JavaScript library for client and server side bioinformatics

Basic kaplan-meier methods