BioJS | npm.io

Graph theory (a.k.a. network) library for analysis and visualisation

graph graph-theory network node edge vertex link analysis visualisation visualization

3.29.2 • Published 25 days ago

Parser for BAM and BAM index (bai) files

bionode biojs bam genomics

2.0.2 • Published 3 months ago

read from a compressed bgzip file (with .gzi) as if it were uncompressed

bionode biojs

1.4.7 • Published 6 months ago

Renders snippets on demand

biojs sniper templates

0.2.17 • Published 8 years ago

WebGL protein viewer

protein 3d webgl biojs

1.8.1 • Published 9 years ago

uniform interface for accessing binary data from local files, remote HTTP resources, and browser Blob data

bionode biojs ucsc genomics

3.1.2 • Published 3 months ago

range utility functions

range utils teselagen biojs

2.6.6 • Published 2 years ago

A library of parsers for interconverting between genbank, fasta, and (eventually) sbol through Teselagen's intermediary json format

genbank fasta parser dna rna protein snapgene geneious prot sbol

9.3.6 • Published 1 year ago

read and write GFF3 data as streams

bionode biojs gff3 gff genomics

1.3.0 • Published 1 year ago

sequence utility functions

sequence dna enzyme digest aminoacid utils teselagen biojs

5.2.16 • Published 1 year ago

Display multiple sequences

bio biological biojs galaxy-vis msa multiple sequence alignment fasta clustal

1.0.3 • Published 8 years ago

BioJS event system

biojs event

0.0.4 • Published 10 years ago

Read Tabix-indexed files, supports both .tbi and .csi indexes

bionode biojs genomics

1.5.13 • Published 4 months ago

read indexed fasta and bgzipped fasta formats

fasta genomics biojs bionode

2.1.0 • Published 8 months ago

High performance streaming Variant Call Format (VCF) parser in pure JavaScript

vcf genomics bionode biojs

5.0.10 • Published 1 year ago

Nucleotide sequence manipulation and analysis library

nucleotide nucleic acid dna rna sequence bioinformatics biotechnology computational biology

1.1.0 • Published 7 years ago

read CRAM files with pure Javascript

cram genomics bionode biojs

2.0.3 • Published 3 months ago

A simple menu builder

menu biojs

0.0.7 • Published 9 years ago

Color schemes for residues

biojs color schemes

1.0.10 • Published 8 years ago

A module to analyze multiple seqs (information content, frequency, ...)

seqs msa entropy information content biojs

0.1.21 • Published 8 years ago

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BioJS Packages

cytoscape

@gmod/bam

@gmod/bgzf-filehandle

sniper

bio-pv

generic-filehandle

ve-range-utils

bio-parsers

@gmod/gff

ve-sequence-utils

msa

biojs-events

@gmod/tabix

@gmod/indexedfasta

@gmod/vcf

ntseq

@gmod/cram

menu-builder

msa-colorschemes

stat.seqs