Genomics Packages

create indexed fasta files

read and write GTF data as streams

The 'pca-plot' package is a way to check seq data quality. It visualises the data conditionally in a 2D or 3D plot (dependent on the number of PCs selected), where each point represents a sample. The distance between the points is a measure of the similar

RNA-Seq Plots is a collection of React.js components designed to visualise RNA sequencing data. The package includes a Volcano Plot and a Principal Component Analysis (PCA) plot, both of which are powered by Highcharts.

A React+D3 based genome feature rendering

bioinformatics package for node-red (genomic analysis)

bioinformatics package for node-red (sequence management)

bioinformatics package for node-red (input / output)

igv.js =======

A utility pipeline for visualizing and analyzing genomic data, designed for bioinformatics applications.

This is a compilation of visualization components made in Vue and D3 designed to display genomics data in a reactive way.

ElizaOS MCP plugin for biostratum - a comprehensive MCP composer and adapter solution

JavaScript library for GA4GH Phenopackets, generated from protobuf definitions.

See https://github.com/igvteam/igv.js

Embeddable genomic visualization component based on the Integrative Genomics Viewer

uniform interface for accessing binary data from local files, remote HTTP resources, and browser Blob data

HiGlass Hi-C / genomic / large data viewer

read indexed fasta and bgzipped fasta formats

GenoBank.io Authentication & File Import Module - Web3/OAuth login and universal genomic file import for any web application with enhanced error handling, network flexibility, and framework adapters

An elegant CLI wizard enhancing biotech research efficiency, with adaptable features for other domains, albeit with minor constraints.