Bioinformatics | npm.io

A library to support headers compatible with BITK's standard.

bioinformatics header biowonks comparative genomics

0.1.0-0 • Published 6 years ago

Streamable FASTA parser

bio biology bioinformatics bionode fasta parser streams cli science

0.5.6 • Published 8 years ago

.fasta and .fastq parsers

bioinformatics fasta fastq

1.1.2 • Published 4 years ago

Biological Sequence in Javascript, written in Typescript.

bioinformatics sequence FASTA PHYLIP biowonks biology

0.3.3-0 • Published 5 years ago

Buffer Stream parser from FASTA to JSON

bio biology bioinformatics fasta parser streams science

0.1.0 • Published 11 years ago

Sequence Alignment Algorithms implemented in Javascript, with a command line application

bioinformatics alignment sequence algorithm science

0.0.8 • Published 5 years ago

Run docker containers in parallel. locally or cloud. actively used for Bioinformatics pipelines at Radiant Genomics

Docker AWS EC2 pipeline bioinformatics

0.0.37 • Published 8 years ago

A unique visualisation of any large chunk of DNA or RNA residing in ASCII text files (such as FASTA, GBK etc and also just .txt like my hand-made test files), AminoSee is a way to render huge genomics files into a left-to-right top-bottom PNG linear image

dna genomics visualisation renderer genetics bioinformatics bionode amino acids peptides codons

1.32.8 • Published 5 years ago

Manage BED (Browser Extensible Data) files with Node.JS (Bioinformatics)

bioinformatics bed genomic genome

1.0.3 • Published 9 years ago

Node.js module for working with the NCBI API (aka e-utils) using Streams.

bio bionode bioinformatics biology ncbi api streams client server cli

2.0.1 • Published 8 years ago

JavaScript parser for the GenBank Flat File (GBF) format

bioinformatics biojs gbf genbank parser

0.0.1 • Published 10 years ago

A simple package to calculate aseq identifiers compatible with Biowonk projects (MiST3, SeqDepot and etc)

bioinformatics biowonks sequences biology

0.1.2-1 • Published 6 years ago

Nucleotide sequence manipulation and analysis library

nucleotide nucleic acid dna rna sequence bioinformatics biotechnology computational biology

0.0.3 • Published 7 years ago

A Node.js wrapper for SRA Toolkit.

bio biology bionode bioinformatics download ftp wrapper installer streams cli

2.0.0 • Published 7 years ago

Software to graphically display the results of a CAFE analysis

phylogenetic tree visualisation bioinformatics

0.0.0 • Published 10 years ago

Manage genome coordinates (Bioinformatics)

bioinformatics genomic coordinates gen-coord jmjuanes

1.1.0 • Published 9 years ago

inflate BGZF format(sync)

bgzf bam sam bioinformatics gzip inflate deflate synchronous

0.0.2 • Published 7 years ago

phyloxml.js is a JavaScript program for reading (SAX style parser) and writing phylogenetic trees in phyloXML format.

phyloXML evolution phylogenetics bioinformatics XML

1.0.0 • Published 6 years ago

Redux data store for CyNetworkViewer

cytoscape visualization graph bioinformatics

0.9.0 • Published 9 years ago

React-based network visualizer using Cytoscpae.js

cytoscape visualization graph bioinformatics

0.9.0 • Published 9 years ago