Jbrowse Packages

JBrowse 2 linear genome view

JBlast - Integrated JBrowse BLAST with Galaxy (JBrowse Server Hook)

Github authentication provider hook built using passport-github2

Provides backend support for JBrowse to write comment track changes to trackData.json file

JBrowse 2 CIVIC API plugin

WIP for displaying graph genome as a view in JBrowse 2

JBrowse 2 HGB API plugin

JBrowse 2 plugin to integrate resources from the ICGC

> Jbrowse 2 plugin for displaying an ideogram

NCBI linkout

NCBI linkout

A viewer for multiple alignment format (MAF) files in JBrowse 2

JBrowse plugin for the multilevel linear view

JBrowse plugin for the multilevel linear view

WIP for displaying 3D protein structure alongside the genome browser

This is an external plugin for the [JBrowse 2](https://jbrowse.org/jb2/) open-source platform for visualizing and integrating biological data. This plugin implements a QuantitativeSequence (quantseq) track type. It builds on the concept of a "dynamic sequ

> JBrowse 2 plugin for Reactome ([Reactome](https://reactome.org/))

A JBrowse Plugin to fetch assembly sequences from GA4GH RefGet compliant servers

## Dev setup

Plugin for using the trackhub registry (http://www.trackhubregistry.org/)